Process raw sequencing data through established Core pipelines, including 16S rRNA amplicon (DADA2), shotgun metagenomic, and bulk RNA sequencing analyses.Perform routine computerized data reduction and analyses, including statistical computations, differential abundance testing, and differential expression testing.Generate draft statistical reports, summary tables, and publication-quality figures, and perform an initial interpretation of results for PI review.Prepare draft research progress reports summarizing analytical results for PI review.Develop and/or maintain databases, and provide consultation, technical assistance, and coordination for a wide variety of investigators or other research faculty.Maintain project databases, sample metadata records, and analysis directories on Core and high-performance computing storage.Maintain and document reproducible analysis workflows and scripts in R, Python, and shell under version control.Track project status and deliverables across concurrent Core projects and coordinate delivery of results to investigators.Assist investigators in determining the appropriate statistical methodology to meet their study needs and objectives.Participate in project intake meetings with investigators to document study objectives, analysis plans, and deliverablesAssist investigators with experimental design questions, including sample size, sequencing depth, and control selection, based on established Core standards prior to sample submission.Use statistical and mathematical software packages to summarize and interpret statistical results.Coordinate study analysis activities for assigned projects.Support dissemination of research results and evaluate new platforms, techniques, and scientific programs.Assist investigators in the preparation and writing of methods, results, figures, and legends for manuscripts and grant proposals.Research and evaluate new software and analytical methods for potential use by the Core.Produce written summaries of method benchmarking and comparisons for Core leadership.Present analytical results and method updates to internal team members and Core clients.Knowledge, Skills, and Abilitie:- Knowledge of general principles, theories, and concepts of genomics and microbiome research, and of industry practices, techniques, and standards.
- Knowledge of next-generation sequencing data types, including 16S rRNA amplicon, shotgun metagenomic, and RNA sequencing data.
- Skill in scripting and statistical programming in R and Python.
- Skill in working in a Linux command-line environment, including the use of high-performance computing resources.
- Skill in microbiome sequence analysis using established pipelines such as DADA2 and QIIME 2.
- Skill in RNA-seq analysis, including alignment, quantification, and differential expression testing.
- Skill in applying biostatistical tools used in the biological sciences and in database development and management.
- Skill in producing effective written communication, including reports, figures, and manuscript-ready materials with limited supervision.
- Ability to explain technical methods and results clearly to investigators without a computational background.
This job posting reflects the general nature and level of work expected of the selected candidate(s). It is not intended to be an exhaustive list of all duties and responsibilities. The institution reserves the right to amend or update this description as organizational priorities and institutional needs evolve.Minimum Qualifications- Bachelor's degree in bioinformatics, computational biology, biostatistics, microbiology, molecular biology, or a closely related field, or equivalent advanced learning attained through experience, required.
- Up to one (1) year of relevant work experience required.
Preferred Qualifications - Master's degree in biological sciences or a closely related field.
- Experience analyzing microbiome sequencing data (16S rRNA amplicon and/or shotgun metagenomics).
- Experience with RNA sequencing analysis workflows, from raw reads through differential expression.
- Experience with version control (Git) and reproducible workflow managers such as Snakemake or Nextflow.
- Experience supporting multiple investigators in a core facility or other service-oriented research environment.
- Experience preparing figures, methods sections, and data submissions for peer-reviewed publications.
- Familiarity with public sequence repositories (SRA, ENA, GEO) and their data submission requirements.
FLSA: Exempt
Full Time/Part Time: Full Time
Number of Hours Worked per Week: 40
Job FTE: 1.0
Work Calendar: Fiscal
Job Category: Research
Benefits Eligible: Yes - Full Benefits
Rate of Pay: DOE
Compensation Type: salary at 1.0 full-time equivalency (FTE)
Grade7
Compensation GuidanceThe
Rate of Pay Field represents the University of Arizona's good faith and reasonable estimate of the range of possible compensation at the time of posting. The University considers several factors when extending an offer, including but not limited to, the role and associated responsibilities, a candidate's work experience, education/training, key skills, and internal equity.
The
Grade Range represent a full range of career compensation growth over time. The university offers compensation growth opportunities within its career architecture. To learn more about compensation, please review our
Applicant Compensation Guide and our
Total Rewards Calculator.
Career Stream and LevelPC1
Job FamilyResearch & Data Analysis
Job FunctionResearch
Type of criminal background check required: Name-based criminal background check (non-security sensitive)
Number of Vacancies: 1
Contact Information for CandidatesDaniel Laubitz,
laubitz@arizona.eduOpen Until Filled: Yes
Documents Needed to Apply: Resume and Cover Letter
Special Instructions to ApplicantApplication: The online application should be completed in its entirety. Blank or missed information may be considered an incomplete submission.
Cover Letter: Should clearly indicate how your skills and professional employment experience meet the Minimum and the Preferred qualifications (if applicable).
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cleryact@arizona.edu.