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University of Pennsylvania, Philadelphia, PA, USA

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"Bioinformatics Analyst"

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Bioinformatics Analyst

Job Description Summary

The Bioinformatics Analyst is a key member of our research team, responsible for applying computational methods and statistical techniques to analyze and interpret large-scale biological data. The role involves developing and executing data processing workflows for next-generation sequencing (NGS) data and other 'omics' datasets. The ideal candidate has a strong background in computational biology and is adept at collaborating with multi-disciplinary scientific teams to drive biological discovery and advance research goals.

Job Responsibilities

  • Data analysis: Process, analyze, and interpret high-throughput sequencing data, including genomic, transcriptomic (RNA-Seq), and single-cell sequencing data.
  • Pipeline development: Design, implement, and optimize robust bioinformatics pipelines and workflows for efficient data processing, quality control, and analysis.
  • Collaboration: Work closely with wet-lab biologists, clinicians, and other scientists to understand research objectives, formulate analysis plans, and interpret results.
  • Documentation: Maintain meticulous records of analysis workflows, code, and methodology to ensure reproducibility and transparency.
  • Data management: Assist with the management, storage, and retrieval of large biological datasets.
  • Visualization: Create and deliver effective data visualizations and reports to communicate findings to technical and non-technical audiences.
  • Continuous learning: Stay up-to-date with the latest developments in bioinformatics, computational biology, and related fields by reading scientific literature and testing new software.
  • Tool support: Provide technical support and training to researchers on the use of bioinformatics tools and resources.
  • Other duties and responsibilities as assigned

Qualifications

  • Bachelor of Science and 3 to 5 years of experience or equivalent combination of education and experience is required. Master's degree in Bioinformatics, Computational Biology, Computer Science, Genetics, or a related field preferred.
  • Proficiency in programming and scripting languages, such as Python and R.
  • Solid experience with standard bioinformatics tools and software packages (e.g., Bowtie, GATK, DESeq2).
  • Experience with Next-Generation Sequencing (NGS) data analysis.
  • Strong understanding of molecular biology and genomics concepts.
  • Experience with statistical analysis techniques as applied to biological data.
  • Familiarity with cloud computing platforms (e.g., AWS, Google Cloud) and high-performance computing (HPC) environments is a plus.
  • Excellent analytical, problem-solving, and critical-thinking skills.
  • Effective communication skills, with the ability to explain complex technical concepts to diverse teams.
  • Ability to work independently and manage multiple projects in a fast-paced, collaborative environment.

This position is contingent upon grant funding.

Job Location - City, State: Philadelphia, Pennsylvania

Department / School: School of Veterinary Medicine

Pay Range: $57,500.00 - $67,000.00 Annual Rate

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