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Centre for Human Genetics, Building for Genomic Medicine, Roosevelt Drive, Oxford, OX3 7BN

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"Senior Research Software Engineer"

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Senior Research Software Engineer

Grade 8

3 February 2026, 12:00 midday

Location

Centre for Human Genetics, Building for Genomic Medicine, Roosevelt Drive, Oxford, OX3 7BN

University of Oxford

Type

Full-time, Fixed-term (36 months)

Salary

£49,119 - £58,265 p.a. (discretionary to £63,489, pro rata incl. £1,730 Oxford weighting)

Required Qualifications

Postgraduate in computer science, engineering, bioinformatics or related
Exceptional Python expertise in scientific computing/backend
AI/large language models interest and engagement
Robust data-intensive workflows and software engineering
Multidisciplinary communication skills

Research Areas

Single-cell omics
Spatial omics
Genomics
Biological imaging
AI/ML analysis
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Senior Research Software Engineer

Senior Research Software Engineer

Location: Centre for Human Genetics, Building for Genomic Medicine, Roosevelt Drive, Oxford, OX3 7BN

The Centre for Human Genetics is seeking an experienced Senior Research Software Engineer to help shape the next generation of the Multi-Dimensional Viewer (MDV) platform, an open-source, web-based system used internationally to explore high-dimensional biological data such as single-cell and spatial omics, genomics, and imaging. MDV is used across academia and industry to democratise biological data analysis and visualisation. In this role, you will act as the technical lead for MDV’s analysis and AI capabilities, playing a central part in defining the platform’s technical roadmap and standards.

You will lead the development of Python-based analysis frameworks that enable MDV workflows, such as differential expression, spatial statistics, and re-clustering, to run as remote jobs on institutional compute infrastructure. You will contribute to the design and implementation of ChatMDV, exposing MDV’s analysis tools through a safe, LLM-based interface, and lead the integration of data versioning to support snapshotting, rollback, and full auditability of projects. Working closely with software engineers, DevOps teams, and experimental collaborators, you will provide technical leadership, contribute to documentation and strategy, promote best practice in data governance and reproducibility, and support publications, grants, and stakeholder engagement.

It is essential that you hold a postgraduate qualification in computer science, engineering, mathematics, physics, bioinformatics, computational biology, or a closely related discipline. You will bring exceptional Python expertise for scientific computing or backend development, alongside experience building robust, data-intensive workflows using sound software engineering practices. You will have a clear interest in AI and large language models, with evidence of engagement through projects, experimentation, or early research use, and a strong motivation to apply these approaches to real biological data problems. You will be comfortable working in multidisciplinary environments, communicating complex technical concepts to non-specialists, and managing your own workload to deliver high-quality outputs to deadline. Experience with biological data analysis, data versioning, containerisation, orchestration tools, or LLM-related frameworks would be an advantage.

Applications for this vacancy should be made online and you will need to upload a supporting statement and CV. Your supporting statement must explain how you meet each of the selection criteria for the post using examples of your skills and experience. Please restrict your documentation to your CV and supporting statement only. Any other documents will be requested at a later date.

This position is offered full time on a fixed term contract for 36 months and is funded by the Small Research Facility. Only applications received before 12 midday on 3 February 2026 will be considered. Please quote 184173 on all correspondence.

Salary: Standard Grade 8: £49,119 - £58,265 with a discretionary range to £63,489 p.a. (pro rata). This is inclusive of a pensionable Oxford University Weighting of £1,730 per year (pro rata).

Contact: recruitment@ndm.ox.ac.uk (Luke Gundry)

Vacancy ID: 184173

Closing Date & Time: 03-Feb-2026 12:00

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Frequently Asked Questions

🎓What qualifications are essential for the Senior Research Software Engineer role?

You must hold a postgraduate qualification in computer science, engineering, mathematics, physics, bioinformatics, or computational biology. Exceptional Python expertise for scientific computing or backend development is required, plus proven experience in data-intensive workflows. A strong interest in AI and large language models (LLMs) with project evidence is essential. See how to write a winning academic CV for tips on highlighting these.

👨‍💻What are the main responsibilities in this Python AI genomics role?

Lead development of Python-based analysis frameworks for MDV platform, including differential expression, spatial statistics, and re-clustering as remote jobs. Design ChatMDV LLM interface, integrate data versioning for auditability, provide technical leadership, and collaborate on documentation, grants, and publications. Focus on data governance and reproducibility in genomics and omics data.

💰What is the salary, contract type, and application deadline?

Salary: Grade 8 £49,119 - £58,265 p.a. (discretionary to £63,489 pro rata, incl. £1,730 Oxford weighting). Contract: Full-time, fixed-term 36 months. Deadline: 12 midday, 3 February 2026. Quote Vacancy ID 184173. Apply online with CV and supporting statement addressing selection criteria.

📝How do I apply for this University of Oxford research software engineer position?

Applications must be made online, uploading only a CV and supporting statement explaining how you meet each selection criterion with examples. No other documents initially. Email recruitment@ndm.ox.ac.uk (Luke Gundry) quoting 184173. Explore research jobs for similar roles.

What advantageous experience is needed for genomics AI work at Oxford?

Advantages include biological data analysis, data versioning, containerisation, orchestration tools, or LLM frameworks. Comfort in multidisciplinary teams, communicating technical concepts, and deadline delivery is key. Check postdoctoral success tips for thriving in research roles.

🔬What is the MDV platform and role in single-cell omics?

MDV is an open-source web-based Multi-Dimensional Viewer for exploring high-dimensional biological data like single-cell omics, spatial omics, genomics, and imaging. You'll lead its analysis and AI capabilities, defining roadmap for international academia/industry use.
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